bioinfo core

home_introduction — Wisdom of the Ancients | from xkcd.com

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Python

Rasterize points in scatterplot

This is needed when the plot has too many points but you would still want the legend and label to be saved as “pdf” to be editable. Works for large heatmaps too. Reference:https://btjanaka.net/blog/matplotlib-figures/

Python

python select items from a list using a boolean array

Source:https://www.geeksforgeeks.org/python-itertools-compress/

Unix

Slurm sbatch specify nodes or node list

Python

Pandas merge or sum values in rows with the same index

When the values are numeric and apply operators: When the values are numeric and apply functions: Source:https://pandas.pydata.org/pandas-docs/version/0.22/generated/pandas.core.groupby.GroupBy.apply.htmlhttps://pandas.pydata.org/docs/reference/api/pandas.core.groupby.GroupBy.sum.html

Python

Python Pandas merge multiple row/column values into one row/column

Merge multiple row or column values into one row or column: Source:https://stackoverflow.com/questions/33098383/merge-multiple-column-values-into-one-column-in-python-pandas

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bioinfo core

Index & solution of bioInfo utilities

Home

Rasterize points in scatterplot

python select items from a list using a boolean array

Slurm sbatch specify nodes or node list

Pandas merge or sum values in rows with the same index

Python Pandas merge multiple row/column values into one row/column